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Structure/Function Relationships in the Calcium ATPase
Sarco(endo)plasmic reticulum calcium-ATPases pump calcium from the cytoplasm
of mammalian cells into organellar structures such as the sarcoplasmic reticulum
in muscle or the endoplasmic reticulum in non-muscle cells. Their threshold
of activation by calcium is of the order of 100-200 nM, so that they
set the resting level of cytoplasmic calcium. In fast-twitch muscle, the
SERCA1 isoform is expressed at high levels and is highly concentrated in
the sarcoplasmic reticulum. Full or partial reactions of calcium transport
can be carried out with vesicles isolated from this source, making it a popular
system for analysis of the mechanism of calcium transport.
Our
research in this field has focused on SERCA molecules. We purified SERCA1
and cloned cDNA encoding SERCA1, SERCA2 and SERCA3. From the deduced amino
acid sequences, we proposed a model of SERCA structure. The key features
include a transmembrane domain made up of 10 transmembrane alpha helices,
a stalk sector made up of helical extensions of transmembrane helices, and
cytopasmic beta-strand, phosphorylation and nucleotide binding domains attached
to the stalk domain at a distance of 60 Å from the transmembrane domain.
This model is verified and refined as new structural data emerge.
We expressed all three proteins in COS-1 or HEK-293 cells
under conditions where we could isolate microsomal fractions and carry out
analysis of full or partial reactions of calcium transport. Then we initiated
a program of determination of the functional consequences of site-directed
mutagenesis. This program has allowed us to localize the two calcium binding
sites to three (or possibly four) transmembrane helices, to localize ATP
binding sites to the cytoplasmic nucleotide binding domain and to identify
highly conserved residues throughout the molecule that are involved in
conformational changes.
From
these analyses, we have proposed a model of calcium transport which begins
when calcium binds to two high affinity sites in the transmembrane domain
that are formed by the precise juxtaposition of three helices. These sites
are accessible from the cytoplasm, but not from the lumen. Phosphorylation
of the enzyme by ATP initiates a series of conformational changes that, through
long range interactions, change the conformation of the transmembrane helices
so that access of calcium to the cytoplasm is lost, access to the lumen is
gained and calcium binding sites are destroyed, releasing calcium to the
lumen.
Our efforts to refine this concept of calcium transport include both functional
and structural analysis. We are using site-directed disulfide mapping of
transmembrane helices to determine their orientation relative to each other
at a few Å resolution, we are analysing the significance of a
calcium binding motif that we defined recently and we are attempting to purify
cytoplasmic domains for eventual crystallization and structural determination. |
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SERCA Publications
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Rice, W.J., Green, N.M. and MacLennan, D.H. (1997)
Site-directed
disulfide mapping of helices M4 and M6 in the
Ca2+ binding domain of SERCA1a,
the Ca2+ ATPase of fast twitch skeletal
muscle sarcoplasmic reticulum. J Biol Chem 272(50):31412-9
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Liu, L.H., Paul, R.J., Sutliff, R.L., Miller, M.L., Lorenz,
J.N., Pun, R.Y., Duffy, J.J., Doetschman, T., Kimura, Y., MacLennan, D.H.,
Hoying, J.B. and Shull, G.E. (1997)
Defective
endothelium-dependent relaxation of vascular smooth muscle and endothelial
cell Ca2+ signaling in mice lacking
sarco(endo)plasmic reticulum
Ca2+-ATPase isoform 3. J
Biol Chem 272(48):30538-45
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MacLennan, D.H., Rice, W.J. and Odermatt, A. (1997)
Structure/function
analysis of the Ca2+ binding and
translocation domain of SERCA1 and the role in Brody disease of the ATP2A1
gene encoding SERCA1. Ann N Y Acad Sci 834175-85
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MacLennan, D.H., Rice, W.J. and Green, N.M. (1997)
The
mechanism of Ca2+ transport by
sarco(endo)plasmic reticulum
Ca2+- ATPases. J Biol Chem
272(46):28815-8
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MacLennan, D.H. and Becker, S.J. (1996) Sarcoplasmic reticulum
Ca2+ ATPases, in Molecular Physiology
and Pharmacology of Cardiac Ion Channels and Transporters (Morad, M.,
Ebashi, S., Trautwein, W. and Kurachi, Y.) Kluwer Academic Publishers Dordrecht,
Holland
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Rice, W.J. and MacLennan, D.H. (1996)
Scanning
mutagenesis reveals a similar pattern of mutation sensitivity in transmembrane
sequences M4, M5 and M6, but not in M8 of the
Ca2+-ATPase of sarcoplasmic reticulum
(SERCA1a). Journal of Biological Chemistry 271(49):31412-31419
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Odermatt, A., Kurzydlowski, K. and MacLennan, D.H. (1996)
The
vmax of the Ca2+-ATPase of cardiac
sarcoplasmic reticulum (SERCA2a) is not altered by
Ca2+/calmodulin-dependent
phosphorylation or by interaction with phospholamban. Journal of
Biological Chemistry 271(24):14206-13
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Toyofuku, T., Curotto Kurzydlowski, K., Narayanan, N. and
MacLennan, D.H. (1994)
Identification
of Ser38 as the site in cardiac sarcoplasmic reticulum Ca(2+)-ATPase that
is phosphorylated by
Ca2+/calmodulin-dependent protein
kinase. Journal of Biological Chemistry 269(42):26492-6
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Skerjanc, I.S., Clarke, D.M., Loo, T.W. and MacLennan, D.H.
(1993)
Deletion
of NH2- and COOH-terminal sequences destroys function of the
Ca2+ ATPase of rabbit fast-twitch
skeletal muscle sarcoplasmic reticulum. FEBS Letters 336(1):168-70
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Clarke, D.M., Loo, T.W., Rice, W.J., Andersen, J.P., Vilsen,
B. and MacLennan, D.H. (1993)
Functional
consequences of alterations to hydrophobic amino acids located in the M4
transmembrane sector of the Ca(2+)-ATPase of sarcoplasmic reticulum.
Journal of Biological Chemistry 268(24):18359-64
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Skerjanc, I.S., Toyofuku, T., Richardson, C. and MacLennan,
D.H. (1993)
Mutation
of glutamate 309 to glutamine alters one Ca(2+)-binding site in the Ca(2+)-ATPase
of sarcoplasmic reticulum expressed in Sf9 cells. Journal of Biological
Chemistry 268(21):15944-50
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MacLennan, D.H., Toyofuku, T. and Lytton, J. (1992)
Structure-function
relationships in sarcoplasmic or endoplasmic reticulum type
Ca2+ pumps. Annals of the
New York Academy of Sciences 6711-10
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Toyofuku, T., Kurzydlowski, K., Lytton, J. and MacLennan,
D.H. (1992)
The
nucleotide binding/hinge domain plays a crucial role in determining
isoform-specific Ca2+ dependence
of organellar Ca(2+)-ATPases. Journal of Biological Chemistry
267(20):14490-6
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MacLennan, D.H., Clarke, D.M., Loo, T.W. and Skerjanc, I.S.
(1992)
Site-directed
mutagenesis of the Ca2+ ATPase of
sarcoplasmic reticulum. Acta Physiologica Scandinavica. Supplementum
607141-50
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Lytton, J., Westlin, M., Burk, S.E., Shull, G.E. and MacLennan,
D.H. (1992)
Functional
comparisons between isoforms of the sarcoplasmic or endoplasmic reticulum
family of calcium pumps. Journal of Biological Chemistry
267(20):14483-9
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Clarke, D.M., Maruyama, K., Loo, T.W. and MacLennan, D.H.
(1992) Molecular biology of sarcoplasmic reticulum proteins involved in EC
coupling, in Molecular Biology of the Myocardium (Tada, M.) Japan
Scientific Societies Press Tokyo
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Andersen, J.P., Vilsen, B. and MacLennan, D.H. (1992)
Functional
consequences of alterations to Gly310, Gly770, and Gly801 located in the
transmembrane domain of the Ca(2+)-ATPase of sarcoplasmic reticulum.
Journal of Biological Chemistry 267(4):2767-74
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Vilsen, B., Andersen, J.P. and MacLennan, D.H. (1991)
Functional
consequences of alterations to hydrophobic amino acids located at the M4S4
boundary of the Ca(2+)-ATPase of sarcoplasmic reticulum. Journal of
Biological Chemistry 266(28):18839-45
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Vilsen, B., Andersen, J.P. and MacLennan, D.H. (1991)
Functional
consequences of alterations to amino acids located in the hinge domain of
the Ca(2+)-ATPase of sarcoplasmic reticulum. Journal of Biological
Chemistry 266(24):16157-64
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Clarke, D.M., Loo, T.W. and MacLennan, D.H. (1990)
Functional
consequences of alterations to amino acids located in the nucleotide binding
domain of the Ca2(+)-ATPase of sarcoplasmic reticulum. Journal of
Biological Chemistry 265(36):22223-7
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MacLennan, D.H. (1990)
Molecular
tools to elucidate problems in excitation-contraction coupling.
Biophysical Journal 58(6):1355-65
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Clarke, D.M., Loo, T.W. and MacLennan, D.H. (1990)
The
epitope for monoclonal antibody A20 (amino acids 870-890) is located on the
luminal surface of the Ca2(+)-ATPase of sarcoplasmic reticulum. Journal
of Biological Chemistry 265(29):17405-8
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Clarke, D.M., Loo, T.W. and MacLennan, D.H. (1990)
Functional
consequences of mutations of conserved amino acids in the beta-strand domain
of the Ca2(+)-ATPase of sarcoplasmic reticulum. Journal of Biological
Chemistry 265(24):14088-92
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Clarke, D.M., Loo, T.W. and MacLennan, D.H. (1990)
Functional
consequences of alterations to polar amino acids located in the transmembrane
domain of the Ca2(+)-ATPase of sarcoplasmic reticulum. Journal of
Biological Chemistry 265(11):6262-7
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Vilsen, B., Andersen, J.P., Clarke, D.M. and MacLennan, D.H.
(1989)
Functional
consequences of proline mutations in the cytoplasmic and transmembrane sectors
of the Ca2(+)-ATPase of sarcoplasmic reticulum. Journal of Biological
Chemistry 264(35):21024-30
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Andersen, J.P., Vilsen, B., Leberer, E. and MacLennan, D.H.
(1989)
Functional
consequences of mutations in the beta-strand sector of the Ca2(+)-ATPase
of sarcoplasmic reticulum. Journal of Biological Chemistry
264(35):21018-23
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Burk, S.E., Lytton, J., MacLennan, D.H. and Shull, G.E. (1989)
cDna
cloning, functional expression, and mRna tissue distribution of a third
organellar Ca2+ pump. Journal
of Biological Chemistry 264(31):18561-8
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Maruyama, K., Clarke, D.M., Fujii, J., Loo, T.W. and MacLennan,
D.H. (1989)
Expression
and mutation of Ca2+ ATPases of
the sarcoplasmic reticulum. Cell Motility & the Cytoskeleton
14(1):26-34
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Maruyama, K., Clarke, D.M., Fujii, J., Inesi, G., Loo, T.W.
and MacLennan, D.H. (1989)
Functional
consequences of alterations to amino acids located in the catalytic center
(isoleucine 348 to threonine 357) and nucleotide-binding domain of the
Ca2+-ATPase of sarcoplasmic
reticulum. Journal of Biological Chemistry 264(22):13038-42
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Clarke, D.M., Maruyama, K., Loo, T.W., Leberer, E., Inesi,
G. and MacLennan, D.H. (1989)
Functional
consequences of glutamate, aspartate, glutamine, and asparagine mutations
in the stalk sector of the
Ca2+-ATPase of sarcoplasmic
reticulum. Journal of Biological Chemistry 264(19):11246-51
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Clarke, D.M., Loo, T.W., Inesi, G. and MacLennan, D.H. (1989)
Location
of high affinity
Ca2+-binding sites within the predicted
transmembrane domain of the sarcoplasmic reticulum
Ca2+-ATPase. Nature
339(6224):476-8
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Lytton, J., Zarain-Herzberg, A., Periasamy, M. and MacLennan,
D.H. (1989)
Molecular
cloning of the mammalian smooth muscle sarco(endo)plasmic reticulum
Ca2+-ATPase. Journal of
Biological Chemistry 264(12):7059-65
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Green, N.M. and MacLennan, D.H. (1989)
ATP
driven ion pumps: an evolutionary mosaic. Biochemical Society
Transactions 17(5):819-22
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Maruyama, K. and MacLennan, D.H. (1988)
Mutation
of aspartic acid-351, lysine-352, and lysine-515 alters the
Ca2+ transport activity of the
Ca2+-ATPase expressed in COS-1
cells. Proceedings of the National Academy of Sciences of the United
States of America 85(10):3314-8
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Green, N.M., Taylor, W.R. and MacLennan, D.H. (1988) A consensus
structure for cation pumps, in Ion Pumps, Structure, Function and
Regulation (Stein, W.D. and Karlish, S.J.) Alan R. Liss New York
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Lytton, J. and MacLennan, D.H. (1988)
Molecular
cloning of cDNAs from human kidney coding for two alternatively spliced products
of the cardiac Ca2+-ATPase gene.
Journal of Biological Chemistry 263(29):15024-31
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Brandl, C.J., deLeon, S., Martin, D.R. and MacLennan, D.H.
(1987)
Adult
forms of the Ca2+ATPase of sarcoplasmic
reticulum. Expression in developing skeletal muscle. Journal of Biological
Chemistry 262(8):3768-74
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MacLennan, D.H., Brandl, C.J., Korczak, B. and Green, N.M.
(1986) Calcium ATPases: Contribution of molecular genetics to our understanding
of structure and function, in Proteins of Excitable Membranes (Hille,
B. and Fambrough, D.) Wiley New York
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Brandl, C.J., Green, N.M., Korczak, B. and MacLennan, D.H.
(1986)
Two
Ca2+ ATPase genes: homologies and
mechanistic implications of deduced amino acid sequences. Cell
44(4):597-607
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MacLennan, D.H., Brandl, C.J., Korczak, B. and Green, N.M.
(1985)
Amino-acid
sequence of a Ca2+ + Mg2+-dependent
ATPase from rabbit muscle sarcoplasmic reticulum, deduced from its complementary
DNA sequence. Nature 316(6030):696-700
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MacLennan, D. and Reithmeier, R. (1985) Structural analysis
of the Ca2++Mg2+-ATPase of sarcoplasmic
reticulum, in Structure and Function of Sarcoplasmic Reticulum (Fleischer,
S. and Tonomura, Y.) Academic Press New York
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MacLennan, D.H. and Reithmeier, R.A.F. (1982) The structure
of the Ca2+/Mg2+-ATPase of sarcoplasmic
reticulum, in Membranes and Transport (Martonosi, A.N.) Plenum Press
New York
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Reithmeier, R.A. and MacLennan, D.H. (1981)
The
NH2 terminus of the (Ca2+ +
Mg2+)-adenosine triphosphatase is located on the cytoplasmic surface of the
sarcoplasmic reticulum membrane. Journal of Biological Chemistry
256(12):5957-60
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Reithmeier, R.A., de Leon, S. and MacLennan, D.H. (1980)
Assembly
of the sarcoplasmic reticulum. Cell-free synthesis of te
Ca2+ + Mg2+-adenosine triphosphatase
and calsequestrin. Journal of Biological Chemistry 255(24):11839-46
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Klip, A., Reithmeier, R.A. and MacLennan, D.H. (1980)
Alignment
of the major tryptic fragments of the adenosine triphosphatase from sarcoplasmic
reticulum. Journal of Biological Chemistry 255(14):6562-8
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Stewart, P.S. and MacLennan, D.H. (1976)
Isolation
and characterization of tryptic fragments of the adenosine triphosphatase
of sarcoplasmic reticulum. Journal of Biological Chemistry
251(3):712-9
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Stewart, P.S. and MacLennan, D.H. (1974)
Surface
particles of sarcoplasmic reticulum membranes. Structural features of the
adenosine triphosphatase. Journal of Biological Chemistry
249(3):985-93
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MacLennan, D.H., Seeman, P., Iles, G.H. and Yip, C.C. (1971)
Membrane
formation by the adenosine triphosphatase of sarcoplasmic reticulum.
Journal of Biological Chemistry 246(8):2702-10
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MacLennan, D.H. (1970)
Purification
and properties of an adenosine triphosphatase from sarcoplasmic reticulum.
Journal of Biological Chemistry 245(17):4508-18
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