Yoo, J., Ko, S., Kim, H., Sampson, H., Yun, J., Chang, I., Arrowsmith, C., Krause, HM, CHO, S-G. and Lee, W. (2011) Crystal structure of the FTZ-F1 LBD/FTZ peptide complex identifies a new class of nuclear receptor structures. JBC 286: 31225-31231.

Cáceres, L. Necakov, A., Schwartz, C. Roberts, I. and Krause, H.M. (2011) Nitric oxide coordinates metabolism, growth, and development via the nuclear receptor E75. Genes Dev. 25: 1476-1485.

Delvecchio C, Tiefenbach J, Krause HM. (2011) The Zebrafish: A Powerful Platform for In Vivo, HTS Drug Discovery.Assay Drug Dev Technol.

Pardee K, Necakov AS, Krause H. (2011) Nuclear Receptors: Small Molecule Sensors that Coordinate Growth, Metabolism and Reproduction. in A handbook fo transcription factors. ed: Timothy Hughes, Ch 6, 123-153.

Tiefenbach J, Moll PR, Nelson MR, Hu C, Baev L, Kislinger T, Krause HM. (2010) A live zebrafish-based screening system for human nuclear receptor ligand and cofactor discovery. PLoS One. 5(3):e9797.

Horner, M.A., Pardee, K., Liu, S., King-Jones, K., Lajoie, G., Krause, H.M. and Thummel, C.S. (2010) The Drosophila DHR96 Nuclear Receptor Binds Cholesterol and Regulates Cholesterol Homeostasis. Genes Dev; 23: 2711-2716.

Pardee, K., Reinking, J., Schuetz, A., Tiefenbach, S., Krause, H.M. * and Edwards A.*(2009) The Human Nuclear Receptors Rev-erba and Rev-erbb mediate Gas-Responsive transcription. PLoS Biology7(2), 384-398. * co-senior authors.

Lecuyer, E., Yoshida, H. and Krause, H.M. (2009) Global implications of mRNA localization pathways in cellular organization. Current Opinions in Cell Biology21. 

Lécuyer, E. Necakov, A. Cáceres, L., Krause, H. M. (2008) High-Resolution Fluorescent In situ Hybridization in Drosophila Embryos and Tissues. CSH Protocols.

dos Santos, G. and Krause, H.M. (2008) A stem-loop structure in the wingless transcript defines a consensus motif for apical RNA transport. Development, 135, 133-143.

Lécuyer, E., Yoshida, H., Parthasarathy, N., Alm, C., Babak, T., Cerovina, T., Hughes, T.R., Tomancak, P.and Krause, H.M. (2007) Global Analysis of mRNA Localization Reveals a Prominent Role in Organizing Cellular Architecture and Function. Cell131, 174-187.

Palanker, L., Sampson, H., Necakov, S., Ni, R., Hu, C., Thummel, C.S. and Krause, H.M. (2006) Dynamic regulation of Drosophila nuclear receptor activity in vivoDevelopment133, 3549-3562.

Reinking, J., Lam, M., Pardee, K., Yang, P., Williams, S., Yudin, A., Edwards A., and Krause, H.M. (2005) The nuclear receptor E75 binds heme and is regulated by Nitric oxide. Cell122, 195-207.

Dietrich, B.H., Yang, P. and Krause, H.M. (2005) Tantalus, a link between Notch signaling and chromatin remodeling. Genes, Development and Evolution. Published online: 17 February 2005

Pardee, K., Reinking, J. and Krause, H.M. (2004) Nuclear hormone receptors, metabolism and aging; what goes around comes around. SAGE KE 47:24, re8.

Baker, K., Shewchuk, L., Kozlova, T. Makishima, M., Hassell, A., Wisely, B., Lambert, M., Reinking, J., Krause, H.M., Thummel, C., Willson, T., and Mangelsdorf , D. (2003) The Drosophila orphan nuclear receptor DHR38 mediates an atypical ecdysteroid signaling pathway. Cell 113, 731-742.

Baker, K., Shewchuk, L., Kozlova, T. Makishima, M., Hassell, A., Wisely, B., Lambert, M., Reinking, J., Krause, H.M., Thummel, C., Willson, T., and Mangelsdorf , D. (2003) The Drosophila orphan nuclear receptor DHR38 mediates an atypical ecdysteroid signaling pathway. Cell 113, 731-742.

Nasiadka, A. and Krause, H.M. (2002) Transcriptional regulation during early Drosophila development. In: Advances in Developmental Biology and Biochemistry: Regulation of Gene Expression at the Beginning of Development. 12, Elsevier Science, Melvin DePamphilis, editor, 155-204.

Simmonds, A.J., dos Santos, G., Livne-Bar, I. and Krause, H.M., (2001) Subcellular localization of wingless transcripts is required for signaling activity. Cell105, 197-201.

Hughes, S.C. and Krause, H.M. (2001) Establishment and maintenance of parasegmental compartments in Drosophila embryos. Development128, 1109-1118.

Schwartz, C.J.E., Sampson, H.M., Hlousek, D., Percival-Smith, A., Copeland, J.W.R. and Krause, H.M. (2001) FTZ-Factor1 and Fushi tarazu interact via conserved nuclear receptor and coactivator interaction motifs. EMBO J., 20, 510-519.

Nasiadka, A., Grill, A. and Krause, H.M. (2000) Mechanisms regulating target gene selection by the homeodomain-containing protein Fushi tarazu. Development127, 2965-2976.

Nasiadka, A. and Krause, H.M. (1999) Kinetic analysis of segmentation gene interactions in Drosophila embryos. Development126:1515-1526.

Saulier-Le Drean, B., Nasiadka, A., Dong, J. and Krause, H.M. (1998) Dynamic changes in the functions of Odd-skipped during early Drosophila development. Development125, 4851-4861.

Simmonds AJ, Liu X, Soanes KH, Krause HM, Irvine KD and Bell JB (1998) Molecular interactions between Vestigial and Scalloped promote wing formation in DrosophilaGenes and Development, 12, 3815-3820.

Dong, J., Hung, L.-H., Strome, R. and Krause, H.M. (1998) A phosphorylation site in the Ftz homeodomain is required for activity. EMBO J. 17, 2308-2318.

Hughes, S. and Krause, H.M. (1998) Single and double FISH protocols for Drosophilain: Methods in Molecular Biology, vol. 122: Protocols in Confocal Microscopy., ed. Stephen Paddock, Humana Press Inc., 93-101.

A. Guichet, J. W. R. Copeland, M. Erdélyi, D. Hlousek, P. Zavorszky, J. Ho, S. Brown, A. Percival-Smith, H. M. Krause and A. Ephrussi (1997) The nuclear receptor homologue Ftz-F1 and the homeodomain protein Ftz are mutually dependent cofactors. Nature385, 548-552.

Copeland, J., Dietrich, B., Nasiadka, A. and Krause, H.M. (1996) Patterning of the Drosophila embryo by a homeodomain-deleted Ftz polypeptide. Nature379, 162-165.