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We are interested in understanding cellular signalling processes in budding
yeast using functional genomics, high content screening and gene expression
tools.
1) Functional Genomics:
Our lab uses synthetic genetic array (SGA) technology combined with a
variety of libraries of yeast strains to genetically screen for interactions
of enzymes (e.g. protein kinases, lysine deacetylases) and their targets. We
create a variety of resources, databases and collections for the community
with application to the SGA platform, including a selection of
overexpression arrays.
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2) Phenomics:
We have combined SGA with high content screening (HCS) to assess changes in
protein localization and abundance under a variety of genetic, environmental
and chemical stresses using rapid image acquisition and analysis. SGA-HCS
is also used to detect mutants that show defects in their sub-cellular
morphology, such as reduced formation of DNA damage foci.
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3) Cell cycle-regulated transcription
Our lab has pioneered the use of SGA for genome wide analysis of reporter
gene-expression, particularly for studying transcriptional changes
throughout the cell cycle. We are also interested in understanding cell
cycle processes and molecular players that regulate endocytosis via directed
mechanistic studies.
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4) Collaborations:
Our lab is involved in a number of ongoing collaborative projects. We are
closely collaborating with Dr. Charlie Boone, to understand genetic
redundancy and natural variation in yeast strains. |
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| © Copyright 2011 Andrews Lab |
13th Floor, The Donnelly Centre, 160 College Street Toronto, ON M5S 3E1 |
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